3 interactive concept widgets for Biotechnology: Principles and Processes. Drag any slider, change any number, and watch the formula and the answer update live. Built so you understand how each NEET problem actually works, not just the final number.
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Select EcoRI, HindIII, SmaI, or BamHI to see its palindromic recognition sequence, where it cuts, and whether it produces sticky or blunt ends. Compare all four in the reference table.
Select an enzyme to see its recognition sequence, palindrome structure, and cut pattern.
Isolated from: E. coli RY13 (name derived from first letter of genus + two letters of species + isolation order)
5'
G
A
A
T
T
C
3'
3'
G
A
A
T
T
C
5'
5'
···G | AATTC···
3'
3'
···CTTAA | G···
5'
5'···G
3'···CTTAA
AATTC···3'
G···5'
| Enzyme | Recognition | End type | Overhang |
|---|---|---|---|
| EcoRI | GAATTC | sticky | 4 nt |
| HindIII | AAGCTT | sticky | 4 nt |
| SmaI | CCCGGG | blunt | None |
| BamHI | GGATCC | sticky | 4 nt |
Step through each PCR cycle phase, see the temperature for each step, and watch the copy count double. Adjust cycle number to see 2^n amplification on a log-scale chart.
Walk through each PCR step and watch the copy count double every cycle.
94 – 98°C
of 30 (standard)
2
High heat breaks the hydrogen bonds between complementary base pairs. The double-stranded DNA melts into two single-stranded templates. Each strand will serve as a template in the next step.
Why high temperature? Hydrogen bonds are weak individually but collectively strong — you need 94+ °C to separate an entire chromosome region reliably.
| Component | Role |
|---|---|
| Template DNA | Source of the target sequence to amplify |
| Forward primer | Binds 3' end of top strand; defines left boundary |
| Reverse primer | Binds 3' end of bottom strand; defines right boundary |
| Taq polymerase | Thermostable enzyme; synthesises new strand 5' to 3' |
| dNTPs | Building blocks (dATP, dTTP, dGTP, dCTP) for new strands |
| MgCl₂ buffer | Cofactor for Taq; optimal ionic environment |
12-question scored quiz covering restriction enzymes, palindromic sequences, PCR steps and calculations, gel electrophoresis, pBR322 insertional inactivation, and transformation methods.
12 NEET-style questions on restriction enzymes, PCR, gel electrophoresis, and vectors.
EcoRI recognises the sequence 5'-GAATTC-3'. This sequence is called a:
Drag, slide and recompute on the next chapter's widgets.
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